Robotics teaching kit TX1 configuration

Accelerated Computing Teaching and Curriculum Support
1

Hi. I’m new to the kit and I’m trying to run lab module 1. When I run rosjet_install.sh i’m encountering problems. It is not able access ubuntu and another problem I faced was that it does not run the full installation script because it says catkin_make command not found. I’m very new to this stuff and hence I’m having trouble getting past it. Jethost installed perfectly in my host machine though. Please help

2

From: Srivats2794
Sent: Thursday, March 30, 2017 9:28 AM
To: Joe
Subject: RE: Robotics teaching kit TX1 configuration

Thanks a lot for your help Joe

Srivats2794

On Mar 30, 2017, at 10:02, Joe wrote:
Yes, you should be able to see the commit. If you pull, it should update.

Joe

From: Srivats2794
Sent: Thursday, March 30, 2017 9:01 AM
To: Joe
Subject: RE: Robotics teaching kit TX1 configuration

You fixed it in the bitbucket repo? Should I download the new one?

Srivats2794

On Mar 30, 2017, at 09:43, Joe wrote:
Hi Srivatsan,

I just committed a fix that was messing up auto login, have a look and see if that helps.

Kind Regards,

Joe

From: srivats2794
Sent: Wednesday, March 29, 2017 4:58 PM
To: Joe
Subject: RE: Robotics teaching kit TX1 configuration

Hi Joe
I have attached the two images which show errors (highlighted). I tried the rosjet from the Kit version I downloaded today from bitbucket. Kindly help me with this. I’m not able to move ahead with the course because I’m not able to get around this issue. I’m also facing a problem where my TX1 keeps going into low graphics mode as soon as I flash it and I have tried many solutions but none seem to work. If I need to use the GUI mode again from my TX1, i’m forced to reflash it again. If you know why this is happening kindly let me know.
I apologize for the trouble.

Thank you

Srivats2794

External Media

External Media

On Wed, Mar 29, 2017 at 3:21 PM, Joe wrote:
Can you post the exact error messages you are getting (maybe screen shots)?

Also, do you have the latest pulls from the repo? When did you download the kit?

3

hi Joe

I tried the updated rosjet_install.sh. It is still not installing. I’m trying many things but nothing seems to work. I’m attaching the entire terminal run when I run rosjet_install.sh. Could you suggest a fix or any other way to get ros on the jet to fit the course requirements?

Thank you

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The following packages were automatically installed and are no longer required:
apt-clone archdetect-deb dmeventd dmraid dpkg-repack gir1.2-timezonemap-1.0
gir1.2-xkl-1.0 grub-common kpartx kpartx-boot libdebian-installer4
libdevmapper-event1.02.1 libdmraid1.0.0.rc16 liblockfile-bin liblockfile1
liblvm2app2.2 liblvm2cmd2.02 libparted-fs-resize0 libreadline5
lockfile-progs lvm2 os-prober pmount python3-icu python3-pam rdate
ubiquity-casper ubiquity-ubuntu-artwork ubuntu-core-launcher
Use ‘sudo apt autoremove’ to remove them.
The following additional packages will be installed:
bzr docutils-common docutils-doc javascript-common libapr1 libaprutil1
libexpat1-dev libjs-excanvas libjs-jquery libpython-all-dev libpython-dev
libpython2.7-dev libserf-1-1 libsvn1 mercurial mercurial-common python-all
python-all-dev python-bzrlib python-catkin-pkg python-catkin-pkg-modules
python-chardet python-configobj python-crypto python-dateutil
python-docutils python-gpgme python-httplib2 python-keyring
python-launchpadlib python-lazr.restfulclient python-lazr.uri python-oauth
python-pil python-pip-whl python-pkg-resources python-pygments python-roman
python-rosdistro python-rosdistro-modules python-rospkg
python-rospkg-modules python-secretstorage python-setuptools
python-simplejson python-six python-vcstools python-wadllib python-wheel
python-yaml python-zope.interface python2.7-dev subversion
Suggested packages:
bzr-doc bzrtools python-bzrlib.tests apache2 | lighttpd | httpd qct kdiff3
| kdiff3-qt | kompare | meld | tkcvs | mgdiff python-mysqldb python-openssl
python-bzrlib-dbg python-kerberos python-paramiko python-pycurl
python-configobj-doc python-crypto-dbg python-crypto-doc
texlive-latex-recommended texlive-latex-base texlive-lang-french
fonts-linuxlibertine | ttf-linux-libertine python-fs python-gdata
python-kde4 python-keyczar python-testresources python-pil-doc
python-pil-dbg ttf-bitstream-vera python-secretstorage-doc
python-setuptools-doc db5.3-util subversion-tools
The following NEW packages will be installed:
bzr docutils-common docutils-doc javascript-common libapr1 libaprutil1
libexpat1-dev libjs-excanvas libjs-jquery libpython-all-dev libpython-dev
libpython2.7-dev libserf-1-1 libsvn1 mercurial mercurial-common python-all
python-all-dev python-bzrlib python-catkin-pkg python-catkin-pkg-modules
python-chardet python-configobj python-crypto python-dateutil python-dev
python-docutils python-gpgme python-httplib2 python-keyring
python-launchpadlib python-lazr.restfulclient python-lazr.uri python-oauth
python-pil python-pip python-pip-whl python-pkg-resources python-pygments
python-roman python-rosdep python-rosdistro python-rosdistro-modules
python-rosinstall python-rospkg python-rospkg-modules python-secretstorage
python-setuptools python-simplejson python-six python-vcstools
python-wadllib python-wheel python-wstool python-yaml python-zope.interface
python2.7-dev subversion
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python-catkin-pkg-modules python-catkin-pkg python-rospkg-modules
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python-vcstools python-wstool python-rosinstall
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4

Hi srivats,

Please replace all instances of “jade” with "kinetic, as this is recently required for Jetson TX1/TX2. We are working on forking into two install scripts on the repo now.

Kind Regards,
Joe

5

Perhaps the issue is that this line should be changed to “xenial” instead of “trusty”:

sudo sh -c ‘echo “deb http://packages.ros.org/ros/ubuntu trusty main” > /etc/apt/sources.list.d/ros-latest.list’

becomes

sudo sh -c ‘echo “deb http://packages.ros.org/ros/ubuntu xenial main” > /etc/apt/sources.list.d/ros-latest.list’

Joe

From: SRIVATS
Sent: Friday, March 31, 2017 3:01 PM
To: Joe
Subject: Re: Jet TX1 install issue

This is my terminal log after I replaced jade with kinetic in my rosjet_install.sh

–2017-03-31 15:58:45-- https://raw.githubusercontent.com/ros/rosdistro/master/ros.key
Resolving raw.githubusercontent.com (raw.githubusercontent.com)… 151.101.56.133
Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|151.101.56.133|:443… connected.
ERROR: cannot verify raw.githubusercontent.com’s certificate, issued by ‘CN=DigiCert SHA2 High Assurance Server CA,OU=www.digicert.com,O=DigiCert Inc,C=US’:
Unable to locally verify the issuer’s authority.
To connect to raw.githubusercontent.com insecurely, use `–no-check-certificate’.
gpg: no valid OpenPGP data found.
Get:1 file:/var/cuda-repo-8-0-local InRelease
Ign:1 file:/var/cuda-repo-8-0-local InRelease
Get:2 file:/var/libopencv4tegra-repo InRelease
Ign:2 file:/var/libopencv4tegra-repo InRelease
Get:3 file:/var/cuda-repo-8-0-local Release [574 B]
Get:4 file:/var/libopencv4tegra-repo Release [347 B]
Get:3 file:/var/cuda-repo-8-0-local Release [574 B]
Get:4 file:/var/libopencv4tegra-repo Release [347 B]
Get:8 Index of /ubuntu-ports xenial-security InRelease [102 kB]
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Get:10 http://packages.ros.org/ros/ubuntu trusty InRelease [4031 B]
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Get:6 Index of /ubuntu xenial InRelease [247 kB]
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404 Not Found [IP: 91.189.91.26 80]
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404 Not Found [IP: 91.189.91.26 80]
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Get:48 Index of /ubuntu xenial/multiverse Sources [179 kB]
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Get:50 Index of /ubuntu xenial/restricted Sources [4808 B]
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Get:55 Index of /ubuntu xenial/restricted Translation-en [2908 B]
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Ign:62 Index of /ubuntu xenial/multiverse arm64 Packages
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404 Not Found [IP: 91.189.91.26 80]
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Fetched 3442 kB in 5s (654 kB/s)
Reading package lists… Done
W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
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W: Target DEP-11 (main/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
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W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Translations (restricted/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11 (restricted/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
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W: Target Translations (multiverse/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11 (multiverse/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11-icons (multiverse/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Translations (main/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11 (main/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11-icons (main/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Translations (universe/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11 (universe/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11-icons (universe/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Translations (restricted/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11 (restricted/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11-icons (restricted/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Translations (multiverse/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11 (multiverse/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11-icons (multiverse/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:30
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W: Target Translations (universe/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:30
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W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:32
W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:32
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W: file:///var/cuda-repo-8-0-local/Release.gpg: Signature by key 889BEE522DA690103C4B085ED88C3D385C37D3BE uses weak digest algorithm (SHA1)
W: Invalid ‘Date’ entry in Release file /var/lib/apt/lists/_var_cuda-repo-8-0-local_Release
W: Invalid ‘Date’ entry in Release file /var/lib/apt/lists/_var_libopencv4tegra-repo_Release
W: GPG error: http://packages.ros.org/ros/ubuntu trusty InRelease: The following signatures couldn’t be verified because the public key is not available: NO_PUBKEY 5523BAEEB01FA116
W: The repository ‘http://packages.ros.org/ros/ubuntu trusty InRelease’ is not signed.
N: Data from such a repository can’t be authenticated and is therefore potentially dangerous to use.
N: See apt-secure(8) manpage for repository creation and user configuration details.
E: Failed to fetch http://us.archive.ubuntu.com/ubuntu/dists/xenial-updates/main/binary-arm64/Packages 404 Not Found [IP: 91.189.91.26 80]
E: Failed to fetch http://us.archive.ubuntu.com/ubuntu/dists/xenial-backports/main/binary-arm64/Packages 404 Not Found [IP: 91.189.91.26 80]
E: Failed to fetch http://us.archive.ubuntu.com/ubuntu/dists/xenial/main/binary-arm64/Packages 404 Not Found [IP: 91.189.91.26 80]
E: Some index files failed to download. They have been ignored, or old ones used instead.
W: Target Packages (main/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Translations (main/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11 (main/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11-icons (main/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Translations (universe/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11 (universe/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11-icons (universe/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target Translations (restricted/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
W: Target DEP-11 (restricted/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
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W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:34
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W: Target DEP-11 (main/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
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W: Target Translations (universe/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11 (universe/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
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W: Target Packages (restricted/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Translations (restricted/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11 (restricted/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11-icons (restricted/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Translations (multiverse/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11 (multiverse/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target DEP-11-icons (multiverse/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:4 and /etc/apt/sources.list:35
W: Target Packages (universe/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:30
W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:30
W: Target Translations (universe/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:30
W: Target DEP-11 (universe/dep11/Components-arm64.yml) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:30
W: Target DEP-11-icons (universe/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:30
W: Target Packages (multiverse/binary-arm64/Packages) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:32
W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:32
W: Target Translations (multiverse/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:32
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W: Target DEP-11-icons (multiverse/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list:28 and /etc/apt/sources.list:32
Reading package lists… Done
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E: Unable to locate package ros-kinetic-ros-base
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The following additional packages will be installed:
bzr docutils-common docutils-doc javascript-common libapr1 libaprutil1
libexpat1-dev libjs-excanvas libjs-jquery libpython-all-dev libpython-dev
libpython2.7-dev libserf-1-1 libsvn1 mercurial mercurial-common python-all
python-all-dev python-bzrlib python-catkin-pkg python-catkin-pkg-modules
python-chardet python-configobj python-crypto python-dateutil
python-docutils python-gpgme python-httplib2 python-keyring
python-launchpadlib python-lazr.restfulclient python-lazr.uri python-oauth
python-pil python-pip-whl python-pkg-resources python-pygments python-roman
python-rosdistro python-rosdistro-modules python-rospkg
python-rospkg-modules python-secretstorage python-setuptools
python-simplejson python-six python-vcstools python-wadllib python-wheel
python-yaml python-zope.interface python2.7-dev subversion
Suggested packages:
bzr-doc bzrtools python-bzrlib.tests apache2 | lighttpd | httpd qct kdiff3
| kdiff3-qt | kompare | meld | tkcvs | mgdiff python-mysqldb python-openssl
python-bzrlib-dbg python-kerberos python-paramiko python-pycurl
python-configobj-doc python-crypto-dbg python-crypto-doc
texlive-latex-recommended texlive-latex-base texlive-lang-french
fonts-linuxlibertine | ttf-linux-libertine python-fs python-gdata
python-kde4 python-keyczar python-testresources python-pil-doc
python-pil-dbg ttf-bitstream-vera python-secretstorage-doc
python-setuptools-doc db5.3-util subversion-tools
The following NEW packages will be installed:
bzr docutils-common docutils-doc javascript-common libapr1 libaprutil1
libexpat1-dev libjs-excanvas libjs-jquery libpython-all-dev libpython-dev
libpython2.7-dev libserf-1-1 libsvn1 mercurial mercurial-common python-all
python-all-dev python-bzrlib python-catkin-pkg python-catkin-pkg-modules
python-chardet python-configobj python-crypto python-dateutil python-dev
python-docutils python-gpgme python-httplib2 python-keyring
python-launchpadlib python-lazr.restfulclient python-lazr.uri python-oauth
python-pil python-pip python-pip-whl python-pkg-resources python-pygments
python-roman python-rosdep python-rosdistro python-rosdistro-modules
python-rosinstall python-rospkg python-rospkg-modules python-secretstorage
python-setuptools python-simplejson python-six python-vcstools
python-wadllib python-wheel python-wstool python-yaml python-zope.interface
python2.7-dev subversion
0 upgraded, 58 newly installed, 0 to remove and 7 not upgraded.
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WARNING: The following packages cannot be authenticated!
python-catkin-pkg-modules python-catkin-pkg python-rospkg-modules
python-rospkg python-rosdistro-modules python-rosdistro python-rosdep
python-vcstools python-wstool python-rosinstall
E: There were unauthenticated packages and -y was used without --allow-unauthenticated
sudo: rosdep: command not found
./rosjet_install.sh: line 30: rosdep: command not found
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Building dependency tree
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E: Unable to locate package ros-kinetic-rosserial-arduino
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ubuntu@tegra-ubuntu:~/catkin_ws/src/rosjet$

Srivats

On Fri, Mar 31, 2017 at 3:11 PM, Joe wrote:
Can you send the full terminal log again?

Joe

From: SRIVATS
Sent: Friday, March 31, 2017 1:18 PM
To: Joe

Subject: Re: Jet TX1 install issue

I tried to run the script after replacing jade with kinetic. But same errors show up again.

Srivats

6

Hi. Your last suggestion helped a little. It is progressing till the caffe installation without any problems. and the catkin_make problem still exists. I have attached my terminal log.

Cloning into ‘caffe’…
remote: Counting objects: 37826, done.
remote: Compressing objects: 100% (49/49), done.
remote: Total 37826 (delta 39), reused 21 (delta 21), pack-reused 37755
Receiving objects: 100% (37826/37826), 48.02 MiB | 3.38 MiB/s, done.
Resolving deltas: 100% (25247/25247), done.
Checking connectivity… done.
error: pathspec ‘dev’ did not match any file(s) known to git.
PROTOC src/caffe/proto/caffe.proto
CXX src/caffe/solver.cpp
CXX src/caffe/layer_factory.cpp
CXX src/caffe/solvers/sgd_solver.cpp
CXX src/caffe/solvers/rmsprop_solver.cpp
In file included from src/caffe/solvers/sgd_solver.cpp:5:0:
./include/caffe/util/hdf5.hpp:6:18: fatal error: hdf5.h: No such file or directory
compilation terminated.
In file included from src/caffe/solver.cpp:8:0:
./include/caffe/util/hdf5.hpp:6:18: fatal error: hdf5.h: No such file or directory
compilation terminated.
Makefile:581: recipe for target ‘.build_release/src/caffe/solver.o’ failed
make: *** [.build_release/src/caffe/solver.o] Error 1
make: *** Waiting for unfinished jobs…
Makefile:581: recipe for target ‘.build_release/src/caffe/solvers/sgd_solver.o’ failed
make: *** [.build_release/src/caffe/solvers/sgd_solver.o] Error 1

(process:8589): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY

(process:8591): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY
Reading package lists… Done
Building dependency tree
Reading state information… Done
The following additional packages will be installed:
python-cairo python-compizconfig python-gtk2
Suggested packages:
python-gtk2-doc
The following NEW packages will be installed:
compizconfig-settings-manager python-cairo python-compizconfig python-gtk2
0 upgraded, 4 newly installed, 0 to remove and 7 not upgraded.
Need to get 1112 kB of archives.
After this operation, 8257 kB of additional disk space will be used.
Get:1 Index of /ubuntu-ports xenial/main arm64 python-cairo arm64 1.8.8-2 [36.4 kB]
Get:2 Index of /ubuntu-ports xenial/main arm64 python-gtk2 arm64 2.24.0-4ubuntu1 [470 kB]
Get:3 Index of /ubuntu-ports xenial-updates/universe arm64 python-compizconfig arm64 1:0.9.12.2+16.04.20160823-0ubuntu1 [30.4 kB]
Get:4 Index of /ubuntu-ports xenial-updates/universe arm64 compizconfig-settings-manager all 1:0.9.12.2+16.04.20160823-0ubuntu1 [575 kB]
Fetched 1112 kB in 1s (919 kB/s)
Selecting previously unselected package python-cairo.
(Reading database … 171312 files and directories currently installed.)
Preparing to unpack …/python-cairo_1.8.8-2_arm64.deb …
Unpacking python-cairo (1.8.8-2) …
Selecting previously unselected package python-gtk2.
Preparing to unpack …/python-gtk2_2.24.0-4ubuntu1_arm64.deb …
Unpacking python-gtk2 (2.24.0-4ubuntu1) …
Selecting previously unselected package python-compizconfig:arm64.
Preparing to unpack …/python-compizconfig_1%3a0.9.12.2+16.04.20160823-0ubuntu1_arm64.deb …
Unpacking python-compizconfig:arm64 (1:0.9.12.2+16.04.20160823-0ubuntu1) …
Selecting previously unselected package compizconfig-settings-manager.
Preparing to unpack …/compizconfig-settings-manager_1%3a0.9.12.2+16.04.20160823-0ubuntu1_all.deb …
Unpacking compizconfig-settings-manager (1:0.9.12.2+16.04.20160823-0ubuntu1) …
Processing triggers for hicolor-icon-theme (0.15-0ubuntu1) …
Processing triggers for man-db (2.7.5-1) …
Processing triggers for gnome-menus (3.13.3-6ubuntu3.1) …
Processing triggers for desktop-file-utils (0.22-1ubuntu5.1) …
Processing triggers for bamfdaemon (0.5.3~bzr0+16.04.20160824-0ubuntu1) …
Rebuilding /usr/share/applications/bamf-2.index…
Processing triggers for mime-support (3.59ubuntu1) …
Setting up python-cairo (1.8.8-2) …
Setting up python-gtk2 (2.24.0-4ubuntu1) …
Setting up python-compizconfig:arm64 (1:0.9.12.2+16.04.20160823-0ubuntu1) …
Setting up compizconfig-settings-manager (1:0.9.12.2+16.04.20160823-0ubuntu1) …

(process:9019): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY

(process:9021): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY

(process:9037): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY

(process:9039): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY

(process:9041): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY

(process:9043): dconf-WARNING **: failed to commit changes to dconf: Cannot autolaunch D-Bus without X11 $DISPLAY
./rosjet_install.sh: line 98: catkin_make: command not found
ubuntu@tegra-ubuntu:~/catkin_ws/src/rosjet$

7

We see a hdf5 issue in conjunction with caffe compilation: can't find hdf5.h when build caffe · Issue #156 · NVIDIA/DIGITS · GitHub
(Need to manually link shared library).

catkin_make will only run after the ROS-base install is completed, and the install directory has been added to the PATH by the script.

The “sr” alias may have been created to re-source the .bashrc file to ensure that catkin_make is accessible from bash.

Try:

Re-run the script after linking the hdf5 static libraries into their generic locations as in the GitHub issue on NV caffe. Caffe installation should complete this time.

Keep in mind the path won’t include x86_64 but aarch64 for ARM.

Also, all references to jade in the install script should read kinetic on xenial. Make sure trusty is replaced with xenial on any 64-bit platform. This can be scripted via the “ISTK1” variable in the bash script.

If the script is run once to add sources for jade, adding sources for kinetic may not override that line in the config file, so sources for jade and kinetic will be present, which could possibly confuse things.

8

Hi Mr. Bungo.

I apologize for the delayed reply. I solved many authentication and security issues that were responsible for many problems I faced before. I only have very small issues left in the script.the few errors that im facing:

Error1: No usb-cam package.
Error 2: rosjet.rosinstall file has security issues and errors.
Error 3: Caffe installation persists even after following the steps you suggested.,

catkin_make worked and ros packages completed installation successfully.

I found out that usb cam package has not been added to the ROS kinetic repository, and needs to be added directly from source using the code:

cd ~/catkin_ws/src
git clone GitHub - ros-drivers/usb_cam: A ROS Driver for V4L USB Cameras
cd …
catkin_make

This solves my first error.

I feel these are just small errors. I have solved all other errors. But i’m not able to figure out how to solve these. Kindly help me.

9

I tried installing on Jetson TX1, JetPack 3.0.

(I made changes, replaced jade with kinetic and trusty with xenial. I also added the flag for authentication not needed with the apt-get install command.)

There was an error for :
sudo apt-get install platformio

I get an error about package not found.

Other than that, I also got an error for the line:
cd src/jethost/jet_arduino/resources/lib

Previous commands succeeded. (At least nothing popped up that I could notice.)

10

@ShaktiD Don’t use JetPack 3.0. I suggest you use JetPacK 2.3.1. Its way better. Also try the TX1 scripts In the new coursewprk material. It works perfectly.

11

@Srivats2794
Thank you. I had started worrying if I need to make alot of hacks here.

This Tx1 scripts in new coursework material, where do I find this?
(I am currently working with the Jet Toolkit from https://developer.nvidia.com/embedded/learn/jet-diy-robotics-kit)

12

https://developer.nvidia.com/teaching-kits-downloads